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1、EMBL biocomputing tutorialsPlant genome dababase tutorial生物信息学机构NCBIInternational Nucleotide Sequence Database Collaboration.EBI USDASanger Centre北京大学生物信息学中心数据库信息发布及其它GenBank Release NotesdbEST summary reportEMBL release notes man?emblDDBJ release notes relnote.htmlEukaryotic promoter database relea
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3、BL数据库提交序列DDBJ Plant R gene database 启动子数据库Eukaryotic promoter database 转录因子数据库FRANSFACooTFD蛋白质数据库SWISS-PROT或TrEMBL PIRPRF PDBSTR bfind?pdbstr-todayProsite结构数据库PDB NDBDNA-Binding Protein Database . /dnabind/index.htmlNMR Nucleic Acids DatabaseProtein Plus Database . /protein/index.htmlSwiss 3Dimage S
4、COPCATH酶、代谢和调控路径数据库KEGG Enzyme Nomenclature Database Protein Kinase Resource (PKR)LIGANDWIT EcoCycUM-BBD多种代谢路径数据库基因调控路径数据库(TRANSPATH)基因组数据库日本水稻基因组数据库(RGP)华大水稻基因组框架图欧洲水稻测序（第12染色体）拟南芥基因组数据库USDA Database Demeters GenomesRiceGenes RiceBlastDBFlyBaseMouse Genome Informatics Saccharomyces Genome Databaseu
5、rl=/url多种基因组数据库文献数据库PubMed OMIMAgricola 关键词为基础的数据库检索EntrezEntrez Nucleotide Sequence SearchEntrez Protein Sequence SearchBatch EntrezSequence Retrieval System, India Sequence Retrieval System, Singapore Sequence Retrieval System, US Sequence Retrieval System, UKGetEntry Nucleotide & Protein Sequence
6、 SearchDatabase Search with Key Words DBGET/LinkDB 序列为基础的数据库检索BLASTFASTABLITZSSearch Electronic PCRProteome analysis多序列分析Clustal multiple sequence alignment. htmlBCMEBI ClustalW analysis系谱分析PAUPEBI ClustalW analysisGCG packagePHYLIP MEGA/METREE Hennig86 GAMBIT . /Research/Programs/MacClade Phylogene
7、tic analysis基因结构预测分析GENSCANGeneFinderGene Feature Searches Grail GrailEXPGeneMark VeilAAT GENEID GenlangGeneParser Glimmer MZEFProcrustes 蛋白质结构预测分析Expasy Predicting protein secondary structure Predicting protein 3D Structures Predicting protein structures 其它分析工具和软件Putative DNA Sequencing Errors Chec
8、kMatInspector FastMWeb Signal ScanBCM Search Launcher Webcutter Translate DNA to proteinABIMsequence motifs:PfamProDom PRINTS 其它多种数据库、分析工具和生物信息学机构多种数据库和分析工具Comparative sequence analysis功能基因组分析Transcription profiling technologies Protocols for cDNA array technology Data management and analysis of gene expression arraysExamples of commercially available filter arrays:GeneFiltersTM (Research Genetics) Gene Discovery Arrays (Genome Systems) AtlasTM Arrays (CLONTECH)
